BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036C04LP1|AL430194
(960 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1745 1856 0.0
>3x_Contig1745
Length = 19830
Score = 1856 bits (935), Expect = 0.0
Identities = 956/962 (99%), Gaps = 2/962 (0%)
Strand = Plus / Plus
Query: 1 accggtattgactgccagccctatttcagagtgtttaacatgaagttacagagtgagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15669 accggtattgactgccagccctatttcagagtgtttaacatgaagttacagagtgagaaa 15728
Query: 61 tatgatccagaaggaaagttcattagacattggcttgaaaatgatgagaatgattcagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15729 tatgatccagaaggaaagttcattagacattggcttgaaaatgatgagaatgattcagac 15788
Query: 121 aatgtccatgagccaaaaccgaatgcrattgttgacttgagagattcaagagagagagtt 180
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 15789 aatgtccatgagccaaaaccgaatgcaattgttgacttgagagattcaagagagagagta 15848
Query: 181 cttgaaaggtttagagaagttatgtagcgtaaggtagatagtgcgatatcgatgatgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15849 cttgaaaggtttagagaagttatgtagcgtaaggtagatagtgcgatatcgatgatgtca 15908
Query: 241 gtcctagccacctatacgtatatacccacttttctgcagaccagcagctcggcacaattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15909 gtcctagccacctatacgtatatacccacttttctgcagaccagcagctcggcacaattc 15968
Query: 301 ttttcttgtctccgtttatgaaagaaacgagacaatttcatgtgatcgtagtcagttaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15969 ttttcttgtctccgtttatgaaagaaacgagacaatttcatgtgatcgtagtcagttaag 16028
Query: 361 tgataagtagatactgggtatactctaaatttcaatttaacagaatgtgccaaattttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16029 tgataagtagatactgggtatactctaaatttcaatttaacagaatgtgccaaattttta 16088
Query: 421 gtcgtctatagcatcgagctttcgatatgaatccacgtcctgccatgttttactacgtgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16089 gtcgtctatagcatcgagctttcgatatgaatccacgtcctgccatgttttactacgtgt 16148
Query: 481 cctggtgtttcatacccacatcaatgattatnatcggtccgaaaggcaatttctatataa 540
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 16149 cctggtgtttcatacccacatcaatgattataatcggtccgaaaggcaatttctatataa 16208
Query: 541 tagcaaaagcacttgaacaagagactacagtcgcagagtggtaccttcgcagcttggatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16209 tagcaaaagcacttgaacaagagactacagtcgcagagtggtaccttcgcagcttggatg 16268
Query: 601 tcattaaaaaagaaatctgatggaaaactcttattgtccagtttggagaaattccgtaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16269 tcattaaaaaagaaatctgatggaaaactcttattgtccagtttggagaaattccgtaat 16328
Query: 661 tcaactaatggttgttgttcagaattcttaaatgtacttagtaagtatatgaagttgaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16329 tcaactaatggttgttgttcagaattcttaaatgtacttagtaagtatatgaagttgaaa 16388
Query: 721 aagttactgacaaaagaactgggaatttgttgttcgcggca-cyacggctctgcaccgga 779
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 16389 aagttactgacaaaagaactgggaatttgttgttcgcggcagctacggctctgcaccgga 16448
Query: 780 aaaatgtagtcacttccgcatttgttgcgaaaatgtctatcgcttgtttgggc-acgctt 838
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 16449 aaaatgtagtcacttccgcatttgttgcgaaaatgtctatcgcttgtttgggcaacgctt 16508
Query: 839 ctcctgttctgtcatatgtgcttccgcacagaaaatccgataggacgcactatgcacaca 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16509 ctcctgttctgtcatatgtgcttccgcacagaaaatccgataggacgcactatgcacaca 16568
Query: 899 gcacgtgacgtgtgtgctatttaggctaacgaattgcatatcgcccagaaacccagcgat 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16569 gcacgtgacgtgtgtgctatttaggctaacgaattgcatatcgcccagaaacccagcgat 16628
Query: 959 tt 960
||
Sbjct: 16629 tt 16630
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6346
Number of Sequences: 1807
Number of extensions: 6346
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 960
length of database: 10,358,551
effective HSP length: 16
effective length of query: 944
effective length of database: 10,329,639
effective search space: 9751179216
effective search space used: 9751179216
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)